Biodiversity Data Journal 11: e100684 CO) doi: 10.3897/BDJ.11.e100684 open access Research Article Two strains Neocosmospora stercicola (Sordariomycetes, Nectriaceae) with high nematicidal activity, isolated from the cysts of Globodera sp. (Heteroderidae) in China Zaifu Yang*§, Hui Zhangt, Zhaochun Jiang!, Xinyue Zhang*, Shan Weit, Yan Wui, Xiuhai Gan", Yong Wang, Xin Xie+ + Department of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, China § Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, China | Guizhou Station of Plant Protection and Quarantine, Guiyang, China | Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang, China Corresponding author: Zaifu Yang (zfyang@gzu.edu.cn), Zhaochun Jiang (zbjzc@163.com) Academic editor: Renan Barbosa Received: 17 Jan 2023 | Accepted: 12 Apr 2023 | Published: 27 Apr 2023 Citation: Yang Z, Zhang H, Jiang Z, Zhang X, Wei S, Wu Y, Gan X, Wang Y, Xie X (2023) Two strains Neocosmospora stercicola (Sordariomycetes, Nectriaceae) with high nematicidal activity, isolated from the cysts of Globodera sp. (Heteroderidae) in China. Biodiversity Data Journal 11: e100684. https://doi.org/10.3897/BDJ.11.e100684 Abstract Plant-parasitic nematodes (PPNs) are significant pests that result in considerable economic losses in global crop production. Due to the high toxicity of chemical nematicides, there is a need to develop new strategies for nematode control. In this context, nematophagous fungi may offer a viable option for biological control. Two fungal strains (GUCC2212 and GUCC2232) were isolated from cysts of Globodera sp., identified as Neocosmospora stercicola. The fungal filtrates of the strains were evaluated for their nematicidal activity against three species of PPNs: Aphelenchoides besseyi, Bursaphelenchus xylophilus and Ditylenchus destructor. The fermentation filtrates of two strains exhibited substantial toxicity towards the evaluated nematodes, with mortality rates reaching up to 100% within 72 h. Concurrently, NV. stercicola also demonstrated predatory and parasitic behavior. The eggs of Globodera sp. were parasitized by the two strains. WN. © Yang Z et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 2 Yang Z et al stercicola represents a newly recorded species in China and a novel nematophagous species. In conclusion, the two strains of NV. stercicola show promise as biocontrol agents for PPNs management. Keywords Plant-parasitic nematodes, NWeocosmospora stercicola, nematophagous fungi, nematicidal activity Introduction Plant-parasitic nematodes (PPNs) are important pests causing economically high yield losses in plants cultivated worldwide (Perry and Moens 2013). Agriculturally impactful nematode species include cyst nematodes (Globodera and Heterodera spp.), root-knot nematodes (Meloidogyne spp.), foliar nematodes (Aphelenchoides spp.), pine wilt nematode (Bursaphelenchus xylophilus Steiner and Buhrer, 1934), Ditylenchus destructor Thorne, 1945, Anguina tritici Filipjev, 1936 (Abdel-Baset and Dawabah 2020, Xu et al. 2020, Kumar and Dara 2021). Among them, Aphelenchoides besseyi Christie, 1942, B. xylophilus and D. destructor are especially important in China. A. besseyi primarily infects rice, causing leaf damage characterized by white tips that progress to necrosis. Affected leaves curl and deform, inflorescences shrink and grain development is hindered, resulting in reduced yields (Kanzaki et al. 2012). In severe cases, yield losses can reach 60% (Bridge et al. 2005). B. xylophilus is responsible for causing many tree diseases globally (Filipiak et al. 2021) and is classified as a quarantine pathogen by most countries in the world (Evans et al. 1996). It is listed among the ten most harmful plant nematodes (Jones et al. 2013). It is mainly spread by the beetle Monochamus alternatus (Hope, 1842) feeding on healthy pine trees (Togashi and Shigesada 2006). When the pine wood nematode enters the stem of pine trees, it migrates through resin canals feeding on parenchyma cells, ultimately killing the host tree (Shinya et al. 2013). It is responsible for causing hundreds of millions of dollars in economic losses globally, including in Japan, the United States and Canada (Carnegie et al. 2018, Lee et al. 2021). D. destructor is also one of the most destructive plant pathogenic nematodes (Jin et al. 2018). It can parasitize more than 120 host plants in China and is one of the main pathogens of Solanum tuberosum and Dioscorea esculenta (Huang et al. 2010), causing a 20% to 50% yield reduction and even 100% crop loss in endemic areas (Fan et al. 2015). In conclusion, the economic impact of these three plant nematodes in China and worldwide is substantial. As they affect various plant parts, including leaves, internal structures and tubers, they serve as representative PPNs for studying damage to different plant components. Consequently, effective control methods for these nematodes may also apply to other plant nematodes. Nowadays, the global population continues to grow, there is an increasing demand for food, which necessitates the effective control of plant-parasitic nematodes(Poveda et al. 2020). However, in agricultural areas, nematicides are often used to prevent the damage of these nematodes. Due to the high toxicity of chemical nematicides, it is necessary to Two strains Neocosmospora stercicola (Sordariomycetes, Nectriaceae) with ... 3 develop new control strategies against nematodes. In this respect, filamentous fungi can be an interesting biocontrol alternative (Zhang et al. 2014). They are able to reduce the damage caused by plant-parasitic nematodes directly by parasitism, antibiosis, paralysis and by the production of lytic enzymes. They also minimize harm by space and resource- competition, by providing higher nutrient and water uptake to the plant or by modifying the root morphology and/or rhizosphere interactions, that constitutes an advantage for the plant-growth (Iqbal et al. 2018). Therefore, the use of filamentous fungi as biological control agents is a promising durable biocontrol strategy in agriculture against plant-parasitic nematodes. The fungal genus Fusarium, characterized by diverse morphology and ecology, is distributed worldwide in plants, plant products, air, water and soil. As a crucial group of plant-pathogenic fungi, Fusarium infects numerous crops, causing root rot, stem rot and other diseases that result in significant yield reductions globally (Summerell 2019, Jayawardena et al. 2020). However, some non-pathogenic F. oxysporum strain have been reported to enhance crop yields by suppressing nematode populations and reducing nematode-related damage (Kisaakye et al. 2022). Fusarium spp. have been associated with Heterodera glycines, Meloidogyne incognita, Globodera rostochiensis, G. pallida and some species exhibiting nematicidal activity (Singh and Mathur 2010, Terra et al. 2018, Zhang et al. 2023). The genus Neocosmospora (Hypocreales, Nectriaceae) has been segregated from the Fusarium solani species complex (O'Donnell 2000). These fungi are widespread in soil, plant debris, living plant material, air, water and even animals, with some species being plant pathogens (Sandoval-Denis et al. 2019). Neocosmospora species have also been associated with H. g/lycines and displaying nematicidal activity against the second-stage juveniles and eggs of H. glycines (Chen et al. 2000, Hu et al. 2018). According to reports, N. stercicola is a less well-known species, has been found in soil and various plant hosts in Europe (Sandoval-Denis et al. 2019, Crous et al. 2021). In this study, colonizing fungi were isolated from cysts of Globodera sp. in Weining County, Guizhou Province, China. Their nematicidal properties were evaluated by in vitro screening. Two strains (GUCC2212, GUCC2232) were found and its fermentation broth exhibited nematicidal activity against A. bessey/, B. xylophilus and D. destructor, mortality rates of 100%, respectively, after 72 h. The two strains were identified as Weocosmospora stercicola based on morphological observations and phylogenetic analysis of the genetic sequence of the internal transcribed spacer (ITS), large subunit (LSU) regions and translation elongation factor (tef7) of DNA. This is the first report of nematicidal activity against A. besseyi, B. xylophilus and D. destructor in the genus Neocosmospora. N. stercicola is the new record species in China. 4 Yang Z et al Material and methods Isolation of fungi from samples Soil samples were obtained from a field of Globodera sp. infected potato fields located in Weining County, Guizhou, China. In each field, 10 plots of a 5 x 5 m grid were chosen around infected potato plants, and an approximate volume of 250 mL of soil from the rhizosphere zone was collected in each grid (0Q-20 cm depth). To make a single composite sample, the separate samples from each plot were collected and combined in a bucket (Southey 1974). To ensure homogeneity, the composite samples were thoroughly mixed. Cysts of Globodera sp. were extracted from a subsample of 500 mL soil that had been air-dried at 37°C for two days (Been and Schomaker 2000, Reid and Pickup 2005, Nurjanah et al. 2016). Using the Baunacke method (Baunacke 1922, Hallman and Viaene 2013), cysts were obtained from a 100 g subsample of dried soil by decanting floating cysts in water and collecting them on a 250 mesh sieve. Subsequently, the cysts were surface sterilized for three minutes using 0.2% H2QOz, followed by three rinses with distilled water. Each sterilized cyst was individually placed on a 1% water agar (WA) plate. The plates were incubated at room temperature and monitored regularly. Mycelia emerging from the cultured cysts were transferred to new potato dextrose agar (PDA) plates multiple times. NV. stercicol/a strains exhibiting high nematicidal activity were preserved in the Culture Collection of the Department of Plant Pathology, Agriculture College, Guizhou University, under strain numbers GUCC2232 and GUCC2212. Collecting nematodes and culturing them Samples of A. besseyi (identified by Zaifu Yang) were collected from rice fields in Dushan County, Guizhou Province, China and the Nematodes of D. destructor were provided by Nematode Laboratory of Fujian Agricultural and Forestry University. In this experiment, carrot callus were used to propagate the nematodes (Tulek et al. 2009). The nematodes were removed from the carrot-callus cultures and sterilized with streptomycin sulphate for 10 minutes, washed three times in double-distilled water and then cultured on carrot discs at 25°C for 30 d. B. xylophilus was provided by the Center for Research and Development of Fine Chemicals of Guizhou University. It was cultured on PDA plates containing Botrytis cinerea (Shi et al. 2013) and grown on the PDA plates at 28°C for 7 d. B. xylophilus was transfered to B. cinerea plates and incubated at 28°C until the colony was consumed. By using the Baermann funnel method (Hallman and Viaene 2013), nematodes were separated from B. cinerea cultures. A nematode suspension was made at a concentration of 1000 nematodes/mL for use in the predatory and nematicidal activity assays of the fungal strains. Two strains Neocosmospora stercicola (Sordariomycetes, Nectriaceae) with ... 5 Fermentation filtrate preparation To prepare potato dextrose broth (PDB) medium, 200 g potatoes were boiled in 1 L of distilled water for 30 minutes. Dextrose was then added to the filtrate after the mixture was filtered through double gauze. Afterward, 100 mL aliquots of the prepared PDB medium were placed into 250 mL conical flasks and were autoclaved for 30 minutes at 121°C. With a sterilized cutting blade, the single pure culture was cut into small pieces approximately 5 mm in diameter. Five pieces were added in 100 mL of sterilized PDB medium, which was then shaken at 28°C for 7 d at 200 rpm on a rotary shaker. Finally, the medium was filtered and stored at 4°C. Morphological observations The fungal strains GUCC2212 and GUCC2232 were inoculated on PDA and cultivated for 7 d at 28°C. Colony morphology was documented using a stereomicroscope (Keyence VHX-7000 digital microscope). A compound light microscope (Zeiss Scope 5) equipped with an AxioCam 208 color camera was used to photograph conidiophores and conidia. To determine the mean _ size, 30 conidiogenous cells, 50 macroconidia, and 50 chlamydospores from each strains were mounted and measured randomly. DNA extraction, PCR and sequencing The fungal strains GUCC2212 and GUCC2232 were cultured on PDA for 7 d at 25°C. Using a sterile scalpel, the mycelia were carefully scraped from the plate's surface. Total genomic fungal DNA was extracted with a BIOMIGA Fungus Genomic DNA Extraction Kit (GD2416, BIOMIGA, San Diego, California, USA) following the manufacturer's instructions. The 5.8S nuclear ribosomal RNA gene was amplified and sequenced, together with the two flanking internal transcribed spacer (ITS), translation elongation factor (tef7) and large subunit (LSU) sections. The primer pairs and PCR amplification protocols ITS5/ITS4 (White et al. 1990a), EF1/EF2 (O'Donnell et al. 1998) and LROR/LR5 (Perera et al. 2020) were used to PCR-amplify ITS, fef7 and LSU, respectively. PCR amplifications were conducted in a reaction mixture containing 12.5 pL 2x Bench Top Taq Master Mix (Biomiga, AT1201, China), 1 uL each of 10 uM primers and 1 uL DNA template, with the final volume adjusted to 25 uL using distilled deionized water. PCR products were visualized on a 1% agarose gel through electrophoresis. Bidirectional sequencing was performed by Sangon Biotech Company (Chengdu, China). Phylogenetic analysis Using BioEdit v.7.2.5 (Hill 1999), forward and reverse primer sequences for each gene were assembled and consensus sequences were merged with relevant sequences obtained from the National Center for Biotechnology Information (NCBI). Table 1 presents the sequences of the two strains investigated in this study, along with 11 reference strains acquired from GenBank (https:/Awww.ncbi.nim.nih.gov/genbank). Sequences for each locus 6 Yang Z et al were aligned using MAFFT v. 7.187 (Katoh and Standley 2013) and alignments were manually adjusted as necessary. Utilizing the maximum likelihood (ML) approach Bayesian inference (Bl) via the CIPRES web platform, a phylogenetic tree was created using the ITS, tef7 and LSU sequences as a concatenated dataset (Miller et al. 2010). Every 100 generations, trees were sampled and runs were automatically ended when the average standard deviation of split frequencies fell below 0.01. After removing the first 25% of samples, a 50% majority rule consensus tree was created. FigTree v1.4.3 (Rambaut and Drummond 2012) and Adobe Illustrator CC 2019 were used to visualize the generated tree. Infection of Globodera sp. eggs with fungi To evaluate their pathogenicity against Globodera sp. eggs, pure fungal cultures were grown on PDA for 7-10 d. Conidial suspensions were prepared by flooding the PDA plates with double-distilled water (DDVW) and the surface scraped. The suspension was diluted with DDW to achieve 1.0 x 10° spores/mL using a haemacytometer. For the egg parasitic ability test, eggs released from cysts by crushing them with a glass rod were suspended in DDW at a concentration of about 100 eggs per 100 uL suspension that was dropped into each well of a 24-multiwell plate containing each spore suspension with three replications. They were all incubated at 25°C and the number of eggs that were parasitized by fungi was examined every three days after incubation. Nematicidal activity of the fungal fermentation filtrate A 100 uL suspension of nematodes containing approximately 100 nematodes was placed into wells of a 96-well culture plate containing different concentrations (100%, 20%, 10%) of the fermentation broth. The distilled water was added into the control wells. The plate was incubated for 72 h at 28°C. After 12, 24, 48 and 72 h, nematodes were examined under a microscope. The nematodes were cleansed and put into distilled water at each timepoint to assess their motility as a sign of nematicidal activity. When nematodes remained immotile after being probed with a fine hair needle, they were judged dead and percentage mortality was calculated. For each concentration and the control, four replicates were examined. Predatory activity of fungal isolates against nematodes in vitro A 5 mm-diameter disc of mycelium was removed from the margins of the fungal isolates, placed to the center of a petri dish containing 1% water agar (WA) and cultured for two weeks in the dark at 25°C. Petri dishes were infected with a 1 mL nematode slurry containing 1000 nematodes after the incubation period. The nematode suspension was separated into 4-5 drops and evenly distributed across the fungal colonies periphery. Control plates were made without fungus. Each strain was tested in four replicates. A Two strains Neocosmospora stercicola (Sordariomycetes, Nectriaceae) with ... 7 compound light microscope (Zeiss Scope 5) with an AxioCam 208 color camera was used to acquire microscopic images. Data analysis The data were subjected to two-way analysis of variance (ANOVA), with concentration and post-treatment time (exposure period) serving as the main treatment effects and concentration x time as the interaction. Significant differences between means were determined at P<0.05 using Duncan’s multiple range. All statistical analyses were performed using MS Excel and SPSS statistics software (version 19.0). Figures were generated using Origin 2018. Results Fungi identification The sequences of the PCR products obtained from strain GUCC2232 and GUCC2212 were uploaded to GenBank and subjected to Basic Local Alignment Search tool (BLAST) analysis. In the phylogenetic tree (Fig. 1), GUCC2232 and GUCC2212 clustered with the type culture of NV. stercicola (CBS 260.54). The ex-type cultures of species, F. stercicola and F. witzenhausenense, also cluster within this clade. Furthermore, the lack of clear distinctive morphological traits between these species, coupled with evidence of significant recombination within this clade according to the PHI test (SiSi¢ et al. 2018), supports their synonymy as WN. stercicola. The colonies of strain GUCC2232 on PDA after 7 d of incubation at 28°C exhibit a white to yellowish-white surface, with abundant cottony aerial mycelium throughout the colony. The reverse pigmentation is yellow at the center and fades to yellowish-white at the margin. The colony margin is undulate with an entire edge(Fig. 2a, b). The odour is strong moldy. Scant production of erect conidiophores, tapering uniformly from base to tip from the agar surface and aerial mycelium. Tip of the phialid with periclinical thickening, collared at most slightly flared (Fig. 2c, d, e). Conidia often held in clear, colourless drops of liquid, 0, 1, 2, 3 (- 4) septate: zero-septate ellipsoidal 11.40 x 4.12 um; one-septate 19.27